Miyakogusa Predicted Gene

Lj0g3v0054399.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MCF4_SOYBN 1445 72.4 77.6 (tr|K7MCF4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G19490.2 1056 57.6 69.8 | Symbols: ATVPS54, VPS54 | VPS54 | chr4:10616017-10622934 FORWARD LENGTH=1034
Medicago Medtr2g047908.1 1413 72.5 77.0 | vacuolar sorting protein | HC | chr2:21009669-20992664 | 20130731
Soybean Glyma09g10070.1 798 82.2 87.4  
LJGI gnl|LJGI|FS353284 1556 100.0 100.0 similar to UniRef100_A7QC25 Cluster: Chromosome chr10 scaffold_76, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_76, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0054399.1 length: 991 aa.
IPR012501 Vps54-like
method AccNumber shortName E-value location
Biological Process GO:0042147 retrograde transport, endosome to Golgi    
HMMPfam PF07928 Vps54 4.6e-47 730-862
IPR019515 Vacuolar protein sorting-associated protein 54
HMMPfam PF10475 DUF2450 2.3e-07 107-295
no_ID  
HMMPanther PTHR12965 VACUOLAR 4.4e-248 13-985
HMMPanther PTHR12965:SF0 SUBFAMILY 4.4e-248 13-985
Seg seg seg NA 13-41
210-229
234-245
251-269
396-419
459-474
Wolf-PSORT
Lj0g3v0054399.1	chlo 7, nucl 2, mito 2, plas 2, nucl_plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0054399.1