Miyakogusa Predicted Gene

Lj0g3v0054069.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B8R498_TRISU 419 99.5 99.5 (tr|B8R498) Photosystem II CP43 chlorophyll apoprotein OS=Trifolium subterraneum GN=psbC PE=3 SV=1
TAIR_pep ATCG00280.1 413 97.6 98.5 | Symbols: PSBC | photosystem II reaction center protein C | chrC:33720-35141 FORWARD LENGTH=473
Medicago Medtr0002s0420.1 410 96.1 97.6 | photosystem II CP43 chlorophyll apoprotein | HC | scaffold0002:208858-211288 | 20130731
Soybean --No_Hits--        
LJGI gnl|LJGI|TC71546 1340 100.0 100.0 homologue to UniRef100_UPI0001596BD5 Cluster: photosystem II CP43 chlorophyll apoprotein; n=1; Medicago truncatula|Rep: photosystem II CP43 chlorophyll apoprotein - Medicago truncatula, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0054069.1 length: 225 aa.
IPR000932 Photosystem antenna protein-like
method AccNumber shortName E-value location
Cellular Component GO:0009521 photosystem    
Biological Process GO:0009767 photosynthetic electron transport chain    
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016168 chlorophyll binding    
Biological Process GO:0019684 photosynthesis, light reaction    
HMMPfam PF00421 PSII 3.2e-98 1-224
no_ID  
Gene3D G3DSA:1.10.10.670 no description 3.3e-46 148-225
Seg seg seg NA 4-19
superfamily SSF81558 Photosystem 1.1e-59 1-218
Putative transmembrane regions
  From To
TM segments
SOSUI		 2 24
46 68
76 98
117 138
Wolf-PSORT
Lj0g3v0054069.1	vacu 5, plas 4, E.R. 2, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0054069.1