Miyakogusa Predicted Gene
- Lj0g3v0050429.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
G7KEN1_MEDTR |
647 |
60.0 |
74.1 |
(tr|G7KEN1) Calcium-transporting ATPase OS=Medicago truncatula GN=MTR_5g097270 PE=4 SV=1 |
TAIR_pep |
AT3G22910.1 |
234 |
31.4 |
51.0 |
| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:8116335-8119388 REVERSE LENGTH=1017 |
Medicago |
Medtr5g097270.1 |
647 |
60.0 |
74.1 |
| cation-transporting ATPase plant | HC | chr5:42594847-42591555 | 20130731 |
Soybean |
Glyma14g01140.1 |
546 |
54.4 |
71.3 |
|
LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0050429.1 |
length: 580 aa. |
IPR001757 |
Cation-transporting P-type ATPase |
method |
AccNumber |
shortName |
E-value |
location |
Biological Process |
GO:0006812 |
cation transport |
|
|
Cellular Component |
GO:0016021 |
integral to membrane |
|
|
Molecular Function |
GO:0019829 |
cation-transporting ATPase activity |
|
|
HMMPanther |
PTHR24093 |
FAMILY |
5.7e-55 |
1-567 |
IPR008250 |
P-type ATPase, A domain |
Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
Molecular Function |
GO:0046872 |
metal ion binding |
|
|
Gene3D |
G3DSA:2.70.150.10 |
no description |
1.4e-14 |
2-149 |
HMMPfam |
PF00122 |
E1-E2_ATPase |
5.8e-14 |
29-296 |
IPR023214 |
HAD-like domain |
Gene3D |
G3DSA:3.40.50.1000 |
no description |
3.3e-06 |
499-573 |
IPR023298 |
P-type ATPase, transmembrane domain |
Gene3D |
G3DSA:1.20.1110.10 |
no description |
3.9e-18 |
260-488 |
IPR023299 |
P-type ATPase, cytoplasmic domain N |
superfamily |
SSF81660 |
Metal |
1.8e-10 |
330-506 |
no_ID |
|
HMMPanther |
PTHR24093:SF0 |
SUBFAMILY |
5.7e-55 |
1-567 |
Seg |
seg |
seg |
NA |
2-13 |
superfamily |
SSF81653 |
Calcium |
1.1e-08 |
59-155 |
- Putative transmembrane regions
|
From |
To |
TM segments
SOSUI |
24 |
46 |
- Wolf-PSORT
Lj0g3v0050429.1 plas 4, cyto 3, nucl_plas 3, E.R._plas 3
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0050429.1 |
|