Miyakogusa Predicted Gene
- Lj0g3v0049149.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L4T8_SOYBN |
468 |
65.3 |
76.2 |
(tr|K7L4T8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G32350.1 |
220 |
53.8 |
71.1 |
| Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr4:15617634-15620642 FORWARD LENGTH=732 |
| Medicago |
Medtr8g103540.1 |
466 |
58.6 |
67.5 |
| regulator of Vps4 activity in the MVB pathway protein | HC | chr8:43568770-43572054 | 20130731 |
| Soybean |
Glyma08g04320.1 |
501 |
55.5 |
63.9 |
|
| LJGI |
gnl|LJGI|TC66704 |
65.9 |
86.7 |
86.7 |
weakly similar to UniRef100_A7PER0 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0049149.1 |
length: 416 aa. |
| IPR005061 |
Domain of unknown function DUF292, eukaryotic |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03398 |
Ist1 |
9.2e-38 |
15-171 |
| no_ID |
|
| HMMPanther |
PTHR12161 |
UNCHARACTERIZED |
2.9e-70 |
1-197 |
| HMMPanther |
PTHR12161:SF1 |
UNCHARACTERIZED |
2.9e-70 |
1-197 |
- Wolf-PSORT
Lj0g3v0049149.1 cyto 4, nucl 3, mito 3, chlo 2, cysk 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0049149.1 |
|