Miyakogusa Predicted Gene

Lj0g3v0049129.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KRM9_SOYBN 361 87.8 92.9 (tr|K7KRM9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G19640.1 273 65.0 79.0 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding family protein | chr4:10687441-10689449 REVERSE LENGTH=200
Medicago Medtr8g103550.1 373 91.5 95.0 | RAB GTPase-like protein A5B | HC | chr8:43575571-43573270 | 20130731
Soybean Glyma05g35400.1 320 87.1 92.7  
LJGI gnl|LJGI|TC80246 1104 98.3 98.3 similar to UniRef100_A7PER1 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (92%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0049129.1 length: 198 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 7.3e-36 11-32
34-50
52-74
114-127
149-171
HMMPfam PF00071 Ras 1.7e-60 12-171
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 2.1e-08 16-195
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 1.2e-11 13-174
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 1.9e-76 11-174
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 9.8e-31 11-167
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 1e-32 8-174
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.8e-60 6-171
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.8e-67 5-197
HMMPanther PTHR24073 FAMILY 3e-105 3-197
HMMPanther PTHR24073:SF132SUBFAMILY NOT 3e-105 3-197
ProfileScan PS51419 RAB 33.014 6-198
Wolf-PSORT
Lj0g3v0049129.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0049129.1