Miyakogusa Predicted Gene

Lj0g3v0048609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XH21_PRUPE 774 57.1 74.4 (tr|M5XH21) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001868mg PE=4 SV=1
TAIR_pep AT4G21300.1 417 34.2 55.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11336479-11339052 FORWARD LENGTH=857
Medicago Medtr1g041310.1 1073 77.2 86.6 | pentatricopeptide (PPR) repeat protein | HC | chr1:15372357-15367000 | 20130731
Soybean Glyma20g29500.1 401 34.3 53.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0048609.1 length: 699 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0016 79-104
214-241
386-412
487-512
586-612
HMMPfam PF13041 PPR_2 9.1e-10 310-356
412-459
516-560
HMMTigr TIGR00756 PPR: 0.0017 214-246
313-347
414-447
487-512
516-549
551-578
587-612
ProfileScan PS51375 PPR 6.401 74-108
142-176
211-245
178-208
246-280
311-345
281-310
412-446
381-411
513-547
482-512
548-578
584-618
650-684
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.1e-12 591-669
no_ID  
HMMPanther PTHR24015 FAMILY 5.2e-184 2-699
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 5.2e-184 2-699
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-16
Wolf-PSORT
Lj0g3v0048609.1	mito 6, chlo 4, nucl 3, cyto_mito 3, mito_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0048609.1