Miyakogusa Predicted Gene
- Lj0g3v0048539.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NGL2_SOYBN |
1767 |
87.7 |
92.4 |
(tr|I1NGL2) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G43810.2 |
1630 |
79.6 |
86.9 |
| Symbols: ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr5:17611939-17616562 FORWARD LENGTH=988 |
| Medicago |
Medtr1g041345.1 |
1767 |
87.7 |
92.7 |
| eukaryotic translation initiation factor 2c | HC | chr1:15404901-15413626 | 20130731 |
| Soybean |
Glyma02g00510.1 |
1767 |
87.8 |
91.2 |
|
| LJGI |
gnl|LJGI|TC76231 |
466 |
97.8 |
97.8 |
similar to UniRef100_Q9XGW1 Cluster: Protein PINHEAD; n=2; Arabidopsis thaliana|Rep: Protein PINHEAD - Arabidopsis thaliana (Mouse-ear cress), partial (7%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0048539.1 |
length: 973 aa. |
| IPR003100 |
Argonaute/Dicer protein, PAZ |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF02170 |
PAZ |
6.3e-34 |
321-456 |
| HMMSmart |
SM00949 |
no description |
8.7e-05 |
324-456 |
| ProfileScan |
PS50821 |
PAZ |
31.730 |
320-434 |
| superfamily |
SSF101690 |
PAZ |
4.4e-56 |
314-475 |
| IPR003165 |
Stem cell self-renewal protein Piwi |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF02171 |
Piwi |
6e-113 |
609-926 |
| HMMSmart |
SM00950 |
no description |
7.7e-125 |
608-928 |
| ProfileScan |
PS50822 |
PIWI |
56.373 |
608-929 |
| IPR012337 |
Ribonuclease H-like domain |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| superfamily |
SSF53098 |
Ribonuclease |
2.9e-85 |
590-934 |
| IPR014811 |
Domain of unknown function DUF1785 |
| HMMPfam |
PF08699 |
DUF1785 |
1.7e-20 |
267-319 |
| no_ID |
|
| Gene3D |
G3DSA:2.170.260.10 |
no description |
8.2e-38 |
319-440 |
| Gene3D |
G3DSA:3.30.420.10 |
no description |
9.6e-18 |
686-923 |
| Gene3D |
G3DSA:3.40.50.2300 |
no description |
2.2e-17 |
493-665 |
| HMMPanther |
PTHR22891 |
EUKARYOTIC |
0 |
115-973 |
| HMMPanther |
PTHR22891:SF0 |
SUBFAMILY |
0 |
115-973 |
| Seg |
seg |
seg |
NA |
40-55 |
- Wolf-PSORT
Lj0g3v0048539.1 cyto 7, nucl 3, cysk 2, chlo 1, mito 1, chlo_mito 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0048539.1 |
|