Miyakogusa Predicted Gene

Lj0g3v0048129.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A4F2M4_PHAVU 874 61.3 69.0 (tr|A4F2M4) Starch synthase III OS=Phaseolus vulgaris GN=PvSSIII PE=2 SV=1
TAIR_pep AT1G11720.2 617 45.9 61.2 | Symbols: SS3 | starch synthase 3 | chr1:3951597-3956840 FORWARD LENGTH=1094
Medicago Medtr2g023320.1 787 58.4 65.7 | soluble starch synthase III-1 | HC | chr2:8219703-8232653 | 20130731
Soybean Glyma13g27480.1 817 59.5 66.3  
LJGI gnl|LJGI|FS324734 1110 99.8 99.8 similar to UniRef100_Q9XGC0 Cluster: Starch synthase isoform SS III; n=1; Vigna unguiculata|Rep: Starch synthase isoform SS III - Vigna unguiculata (Cowpea), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0048129.1 length: 720 aa.
IPR005085 Carbohydrate binding module family 25
method AccNumber shortName E-value location
Molecular Function GO:2001070 starch binding    
HMMPfam PF03423 CBM_25 3.1e-26 251-336
427-516
589-676
HMMSmart SM01066 Carbohydrate 7.5e-22 251-336
426-517
588-677
no_ID  
Coil coil coiled-coil NA 208-236
349-399
Seg seg seg NA 93-107
348-385
545-569
708-718
Putative transmembrane regions
  From To
TM segments
SOSUI		 690 712
Wolf-PSORT
Lj0g3v0048129.1	chlo 10, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0048129.1