Miyakogusa Predicted Gene

Lj0g3v0047979.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L8S8_SOYBN 214 37.6 53.7 (tr|K7L8S8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G06240.1 102 27.5 43.6 | Symbols: | F-box family protein | chr3:1887336-1888619 FORWARD LENGTH=427
Medicago Medtr1g055135.1 192 40.5 54.1 | galactose oxidase | LC | chr1:24309570-24311139 | 20130731
Soybean Glyma08g27950.1 213 37.6 53.7  
LJGI gnl|LJGI|TC77017 2135 99.2 99.2 similar to UniRef100_Q2HV76 Cluster: F-box protein interaction domain; Galactose oxidase, central; n=1; Medicago truncatula|Rep: F-box protein interaction domain; Galactose oxidase, central - Medicago truncatula (Barrel medic), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0047979.1 length: 373 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2e-06 17-52
HMMSmart SM00256 A 1.2e-05 19-59
ProfileScan PS50181 FBOX 9.074 13-59
superfamily SSF81383 F-box 2.2e-11 6-72
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 1.2e-19 123-328
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 5.7e-07 17-55
Seg seg seg NA 334-347
Wolf-PSORT
Lj0g3v0047979.1	cyto 5, nucl 4, chlo 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0047979.1