Miyakogusa Predicted Gene

Lj0g3v0047059.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JAE1_SOYBN 619 71.8 80.2 (tr|I1JAE1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G23860.3 414 48.0 60.8 | Symbols: | PHD finger protein-related | chr4:12409336-12411336 FORWARD LENGTH=452
Medicago Medtr5g009240.2 614 71.9 80.0 | E3 ubiquitin-protein ligase | HC | chr5:2161051-2165816 | 20130731
Soybean Glyma01g43520.2 619 71.8 80.2  
LJGI gnl|LJGI|TC74985 1501 99.6 99.6 similar to UniRef100_A7QUA3 Cluster: Chromosome chr2 scaffold_176, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_176, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0047059.1 length: 425 aa.
IPR003126 Zinc finger, N-recognin
method AccNumber shortName E-value location
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF02207 zf-UBR 5.2e-17 43-108
ProfileScan PS51157 ZF_UBR 9.014 42-112
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 6.4e-11 117-209
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.2e-10 121-194
IPR013993 Zinc finger, N-recognin, metazoa
HMMSmart SM00396 Putative 1.2e-17 42-111
no_ID  
Coil coil coiled-coil NA 337-358
HMMPanther PTHR13513 E3 1.1e-126 10-423
Seg seg seg NA 20-29
352-362
Wolf-PSORT
Lj0g3v0047059.1	nucl 12, vacu 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0047059.1