Miyakogusa Predicted Gene

Lj0g3v0047049.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SCR1_LOTJA 124 83.3 83.3 (tr|I3SCR1) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1

TAIR_pep AT1G27435.1 97.1 64.0 72.0 | Symbols: | unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9527956-9528814 REVERSE LENGTH=81

Medicago Medtr3g074700.1 100 88.9 92.6 | hypothetical protein | HC | chr3:33755907-33755125 | 20130731

Soybean Glyma08g47690.1 105 100.0 100.0

LJGI gnl|LJGI|TC74313 470 100.0 100.0 homologue to UniRef100_A7QUT0 Cluster: Chromosome chr1 scaffold_180, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_180, whole genome shotgun sequence - Vitis vinifera (Grape), partial (80%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0047049.1 length: 78 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 55-66

Wolf-PSORT

Lj0g3v0047049.1 nucl 12, cyto 1, mito 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0047049.1 Not targeted -33.431 0 -5.296 38.08% -28.135

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SCR1_LOTJA	124	83.3	83.3	(tr\|I3SCR1) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep	AT1G27435.1	97.1	64.0	72.0	\| Symbols: \| unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:9527956-9528814 REVERSE LENGTH=81
Medicago	Medtr3g074700.1	100	88.9	92.6	\| hypothetical protein \| HC \| chr3:33755907-33755125 \| 20130731
Soybean	Glyma08g47690.1	105	100.0	100.0
LJGI	gnl\|LJGI\|TC74313	470	100.0	100.0	homologue to UniRef100_A7QUT0 Cluster: Chromosome chr1 scaffold_180, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr1 scaffold_180, whole genome shotgun sequence - Vitis vinifera (Grape), partial (80%)

no_ID
Lj0g3v0047049.1				length: 78 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	55-66