Miyakogusa Predicted Gene
- Lj0g3v0046969.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SRK6_LOTJA |
381 |
100.0 |
100.0 |
(tr|I3SRK6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G23895.2 |
276 |
70.6 |
84.0 |
| Symbols: | Pleckstrin homology (PH) domain-containing protein | chr4:12422883-12424146 FORWARD LENGTH=247 |
| Medicago |
Medtr5g009310.1 |
326 |
84.4 |
91.9 |
| pleckstrin-like (PH) domain protein | HC | chr5:2183459-2186780 | 20130731 |
| Soybean |
Glyma11g02010.5 |
341 |
87.3 |
94.7 |
|
| LJGI |
gnl|LJGI|TC78435 |
1124 |
100.0 |
100.0 |
similar to UniRef100_A7QU98 Cluster: Chromosome chr2 scaffold_176, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_176, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0046969.1 |
length: 188 aa. |
| IPR001849 |
Pleckstrin homology domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Molecular Function |
GO:0005543 |
phospholipid binding |
|
|
| HMMPfam |
PF00169 |
PH |
6.4e-07 |
62-171 |
| HMMSmart |
SM00233 |
Pleckstrin |
0.0052 |
60-176 |
| ProfileScan |
PS50003 |
PH_DOMAIN |
8.648 |
59-174 |
| IPR011993 |
Pleckstrin homology-like domain |
| Gene3D |
G3DSA:2.30.29.30 |
no description |
1.8e-09 |
58-177 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
22-60 |
| superfamily |
SSF50729 |
PH |
6e-11 |
49-174 |
- Wolf-PSORT
Lj0g3v0046969.1 chlo 4, plas 3, nucl 2, extr 2, golg 2, chlo_mito 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0046969.1 |
|