Miyakogusa Predicted Gene

Lj0g3v0044549.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JTC9_MEDTR 214 58.1 75.3 (tr|G7JTC9) Nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_4g021170 PE=4 SV=1
TAIR_pep AT5G36930.2 78.2 48.8 67.5 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571916 REVERSE LENGTH=1191
Medicago Medtr4g021170.1 214 58.1 75.3 | disease resistance protein (TIR-NBS-LRR class) | LC | chr4:6825998-6839517 | 20130731
Soybean Glyma03g14900.1 94.7 65.2 81.2  
LJGI gnl|LJGI|FS323379 194 86.4 86.4 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago truncatula|Rep: TIR; AAA ATPase - Medicago truncatula (Barrel medic), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0044549.1 length: 183 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 6.8e-16 117-183
ProfileScan PS50104 TIR 18.655 113-183
superfamily SSF52200 Toll/Interleukin 1.8e-20 103-183
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 9.9e-12 111-183
HMMPanther PTHR11017 LEUCINE-RICH 2.6e-24 7-183
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 2.6e-24 7-183
superfamily SSF46785 "Winged 3e-11 22-119
Wolf-PSORT
Lj0g3v0044549.1	nucl 6, cyto 4, chlo 2, cyto_pero 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0044549.1