Miyakogusa Predicted Gene
- Lj0g3v0043909.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SCQ2_LOTJA |
557 |
94.2 |
94.2 |
(tr|I3SCQ2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G18640.2 |
389 |
81.0 |
92.5 |
| Symbols: PSP | 3-phosphoserine phosphatase | chr1:6416524-6418245 REVERSE LENGTH=295 |
| Medicago |
Medtr3g025840.1 |
447 |
75.8 |
83.8 |
| phosphoserine phosphatase | HC | chr3:7874115-7880613 | 20130731 |
| Soybean |
Glyma06g22060.1 |
457 |
78.0 |
83.4 |
|
| LJGI |
gnl|LJGI|TC72997 |
1677 |
98.5 |
98.5 |
similar to UniRef100_A7PDA6 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (77%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0043909.1 |
length: 293 aa. |
| IPR004469 |
Phosphoserine phosphatase SerB |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004647 |
phosphoserine phosphatase activity |
|
|
| Biological Process |
GO:0006564 |
L-serine biosynthetic process |
|
|
| HMMTigr |
TIGR00338 |
serB: |
7.8e-43 |
72-277 |
| IPR006383 |
HAD-superfamily hydrolase, subfamily IB, PSPase-like |
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| Molecular Function |
GO:0016791 |
phosphatase activity |
|
|
| HMMTigr |
TIGR01488 |
HAD-SF-IB: |
6.7e-27 |
83-253 |
| IPR023190 |
Phosphoserine phosphatase, domain 2 |
| Molecular Function |
GO:0004647 |
phosphoserine phosphatase activity |
|
|
| Biological Process |
GO:0006564 |
L-serine biosynthetic process |
|
|
| Gene3D |
G3DSA:1.10.150.210 |
no description |
3.8e-21 |
99-154 |
| IPR023214 |
HAD-like domain |
| Gene3D |
G3DSA:3.40.50.1000 |
no description |
6e-31 |
155-291 |
| superfamily |
SSF56784 |
HAD-like |
3.3e-44 |
78-292 |
| no_ID |
|
| HMMPanther |
PTHR10000 |
PHOSPHOSERINE |
1e-56 |
67-292 |
| HMMPanther |
PTHR10000:SF0 |
PHOSPHOSERINE |
1e-56 |
67-292 |
| HMMPfam |
PF12710 |
HAD |
3.6e-15 |
84-253 |
| Seg |
seg |
seg |
NA |
50-65 |
- Wolf-PSORT
Lj0g3v0043909.1 chlo 10, nucl 2, mito 1, vacu 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0043909.1 |
|