| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | A5ATC1_VITVI | 397 | 59.9 | 69.1 | (tr|A5ATC1) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043284 PE=2 SV=1 |
| TAIR_pep | AT5G40250.1 | 344 | 53.1 | 63.4 | | Symbols: | RING/U-box superfamily protein | chr5:16086056-16087186 FORWARD LENGTH=376 |
| Medicago | Medtr6g007737.1 | 367 | 63.5 | 74.1 | | RING-H2 finger protein ATL47 | HC | chr6:1874716-1871663 | 20130731 |
| Soybean | Glyma13g04330.1 | 391 | 66.3 | 75.6 | |
| LJGI | gnl|LJGI|TC71555 | 2139 | 99.2 | 99.2 | similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (59%) |
| Lj0g3v0043789.2 | length: 368 aa. | |||
| IPR001841 | Zinc finger, RING-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF13639 | zf-RING_2 | 2.4e-15 | 140-183 |
| HMMSmart | SM00184 | Ring | 1.2e-06 | 141-182 |
| ProfileScan | PS50089 | ZF_RING_2 | 12.268 | 141-183 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 1.6e-18 | 137-186 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 290-311 |
| HMMPanther | PTHR14155 | RING | 6.8e-65 | 51-187 |
| HMMPanther | PTHR14155:SF23 | OS01G0736600 | 6.8e-65 | 51-187 |
| Seg | seg | seg | NA | 40-69 296-310 |
| superfamily | SSF57850 | RING/U-box | 3.8e-20 | 114-186 |
| From | To | |
|---|---|---|
| TM segments SOSUI |
55 | 77 |
Lj0g3v0043789.2 nucl 3.5, chlo 3, E.R. 3, cysk_nucl 2.5, cyto 1, mito 1, plas 1, vacu 1, mito_plas 1, cyto_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0043789.2 | Not targeted | -53.021 | -1.070 | -2.041 | 79.56% | -49.910 |