Miyakogusa Predicted Gene

Lj0g3v0041899.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ZZF0_MEDTR 832 80.8 87.4 (tr|G7ZZF0) ABC transporter C family member OS=Medicago truncatula GN=MTR_086s0008 PE=3 SV=1
TAIR_pep AT2G34660.2 644 65.1 78.9 | Symbols: MRP2, ABCC2, AtABCC2 | multidrug resistance-associated protein 2 | chr2:14603267-14612387 FORWARD LENGTH=1623
Medicago Medtr3g011820.1 832 80.8 87.4 | multidrug resistance protein ABC transporter family protein | HC | chr3:3016723-3005103 | 20130731
Soybean Glyma06g46940.1 829 80.4 87.8  
LJGI gnl|LJGI|DC595106 771 98.3 98.3 similar to UniRef100_A7Q1C1 Cluster: Chromosome chr10 scaffold_43, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_43, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0041899.1 length: 500 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.8e-17 166-290
ProfileScan PS50893 ABC_TRANSPORTER_2 18.427 125-359
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.3e-11 151-344
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 7e-07 1-117
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 262-276
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.2e-63 104-345
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 3.4e-08 9-103
Gene3D G3DSA:3.40.50.300 no description 9.9e-74 124-360
HMMPanther PTHR24223 FAMILY 7e-280 1-368
HMMPanther PTHR24223:SF110PREDICTED: SIMILAR 7e-280 1-368
Seg seg seg NA 266-285
Wolf-PSORT
Lj0g3v0041899.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0041899.1