Miyakogusa Predicted Gene

Lj0g3v0041639.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MTX9_SOYBN 552 89.4 93.4 (tr|I1MTX9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G07690.1 488 79.1 89.4 | Symbols: MCM5 | Minichromosome maintenance (MCM2/3/5) family protein | chr2:3523379-3527388 REVERSE LENGTH=727
Medicago Medtr4g116870.1 544 88.8 93.7 | DNA replication licensing factor MCM4 | HC | chr4:48392492-48398560 | 20130731
Soybean Glyma17g11220.1 552 89.4 93.4  
LJGI gnl|LJGI|TC65644 1178 99.8 99.8 similar to UniRef100_A7QS04 Cluster: Chromosome undetermined scaffold_155, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_155, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0041639.2 length: 301 aa.
IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
FPrintScan PR01657 MCMFAMILY 2.6e-15 27-40
51-63
78-86
HMMPfam PF00493 MCM 9.1e-83 1-216
HMMSmart SM00350 minichromosome 4.4e-19 1-218
ProfileScan PS50051 MCM_2 47.828 1-104
IPR008048 DNA replication licensing factor Mcm
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003678 DNA helicase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006270 DNA replication initiation    
Cellular Component GO:0042555 MCM complex    
FPrintScan PR01661 MCMPROTEIN5 4e-08 135-150
211-228
IPR018525 Mini-chromosome maintenance, conserved site
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
PatternScan PS00847 MCM_1 NA 7-15
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.1e-27 1-241
no_ID  
Coil coil coiled-coil NA 148-169
Gene3D G3DSA:3.40.50.300 no description 2.5e-21 2-88
HMMPanther PTHR11630 DNA 1.6e-150 1-300
HMMPanther PTHR11630:SF42 DNA 1.6e-150 1-300
Wolf-PSORT
Lj0g3v0041639.2	cysk 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0041639.2