Miyakogusa Predicted Gene

Lj0g3v0041639.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B3GNI3_PEA 796 84.3 89.8 (tr|B3GNI3) Minichromosome maintenance 5 protein OS=Pisum sativum GN=MCM5 PE=2 SV=2
TAIR_pep AT2G07690.1 691 73.5 83.7 | Symbols: MCM5 | Minichromosome maintenance (MCM2/3/5) family protein | chr2:3523379-3527388 REVERSE LENGTH=727
Medicago Medtr4g116870.1 789 83.7 89.0 | DNA replication licensing factor MCM4 | HC | chr4:48392492-48398560 | 20130731
Soybean Glyma17g11220.1 773 82.4 87.4  
LJGI gnl|LJGI|TC59951 1423 99.6 99.6 similar to UniRef100_A7QS04 Cluster: Chromosome undetermined scaffold_155, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_155, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0041639.1 length: 460 aa.
IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
FPrintScan PR01657 MCMFAMILY 6e-14 369-384
429-443
HMMPfam PF00493 MCM 2.8e-62 316-452
HMMSmart SM00350 minichromosome 1.3e-68 134-460
ProfileScan PS50051 MCM_2 56.419 328-452
IPR008048 DNA replication licensing factor Mcm
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003678 DNA helicase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006270 DNA replication initiation    
Cellular Component GO:0042555 MCM complex    
FPrintScan PR01661 MCMPROTEIN5 5.8e-12 139-154
165-177
289-301
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 3.2e-21 223-298
superfamily SSF50249 Nucleic 8.9e-55 37-296
IPR018525 Mini-chromosome maintenance, conserved site
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
PatternScan PS00847 MCM_1 NA 437-445
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.2e-13 332-452
no_ID  
Gene3D G3DSA:3.30.1640.10 no description 1.3e-11 25-104
Gene3D G3DSA:3.40.50.300 no description 1e-17 327-450
HMMPanther PTHR11630 DNA 1.8e-234 1-452
HMMPanther PTHR11630:SF42 DNA 1.8e-234 1-452
Seg seg seg NA 313-325
Wolf-PSORT
Lj0g3v0041639.1	nucl 4, cyto 3, pero 3, cyto_pero 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0041639.1