Miyakogusa Predicted Gene
- Lj0g3v0041149.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MX37_SOYBN |
74.7 |
87.5 |
90.0 |
(tr|I1MX37) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G10780.2 |
55.8 |
82.5 |
87.5 |
| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). | chr5:3408422-3409784 FORWARD LENGTH=187 |
| Medicago |
Medtr8g027900.1 |
74.7 |
84.6 |
87.2 |
| Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein | HC | chr8:10224979-10220259 | 20130731 |
| Soybean |
Glyma17g33800.1 |
75.1 |
87.5 |
90.0 |
|
| LJGI |
gnl|LJGI|TC64964 |
165 |
92.4 |
92.4 |
similar to UniRef100_A8MQD8 Cluster: Uncharacterized protein At5g10780.2; n=1; Arabidopsis thaliana|Rep: Uncharacterized protein At5g10780.2 - Arabidopsis thaliana (Mouse-ear cress), partial (76%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0041149.1 |
length: 61 aa. |
| IPR009445 |
Protein of unknown function DUF1077, TMEM85 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR19315 |
FAMILY |
1.1e-22 |
8-47 |
| HMMPfam |
PF06417 |
DUF1077 |
5e-13 |
6-49 |
| no_ID |
|
| HMMPanther |
PTHR19315:SF4 |
SUBFAMILY |
1.1e-22 |
8-47 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
30 |
51 |
- Wolf-PSORT
Lj0g3v0041149.1 chlo 3, cyto 3, nucl 2.5, cyto_E.R. 2.5, cyto_plas 2.5, plas 2, E.R. 2, cysk_nucl 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0041149.1 |
|