Miyakogusa Predicted Gene
- Lj0g3v0040159.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SMN3_LOTJA |
155 |
89.2 |
94.0 |
(tr|I3SMN3) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT4G38840.1 |
112 |
74.6 |
91.0 |
| Symbols: | SAUR-like auxin-responsive protein family | chr4:18125174-18125473 REVERSE LENGTH=99 |
| Medicago |
Medtr4g072370.1 |
135 |
76.1 |
83.0 |
| SAUR-like auxin-responsive family protein | HC | chr4:27445106-27444636 | 20130731 |
| Soybean |
Glyma12g03820.1 |
144 |
81.1 |
84.4 |
|
| LJGI |
gnl|LJGI|GO020496 |
351 |
92.5 |
92.5 |
similar to UniRef100_P33081 Cluster: Auxin-induced protein 15A; n=1; Glycine max|Rep: Auxin-induced protein 15A - Glycine max (Soybean), partial (90%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0040159.1 |
length: 83 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
7e-31 |
14-82 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
1.1e-29 |
8-83 |
- Wolf-PSORT
Lj0g3v0040159.1 nucl 7, chlo 2.5, chlo_mito 2.5, cyto 2, mito 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0040159.1 |
|