Miyakogusa Predicted Gene
- Lj0g3v0040139.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LSD5_SOYBN |
161 |
81.3 |
90.1 |
(tr|I1LSD5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G18020.1 |
110 |
61.4 |
76.1 |
| Symbols: | SAUR-like auxin-responsive protein family | chr5:5966305-5966580 REVERSE LENGTH=91 |
| Medicago |
Medtr4g072310.1 |
159 |
82.8 |
87.1 |
| SAUR-like auxin-responsive family protein | HC | chr4:27425718-27425999 | 20130731 |
| Soybean |
Glyma08g16510.1 |
161 |
82.2 |
90.0 |
|
| LJGI |
gnl|LJGI|TC61031 |
260 |
87.1 |
87.1 |
similar to UniRef100_P33080 Cluster: Auxin-induced protein X10A; n=1; Glycine max|Rep: Auxin-induced protein X10A - Glycine max (Soybean), partial (88%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0040139.1 |
length: 92 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
6.2e-31 |
15-89 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
1.1e-30 |
1-90 |
- Wolf-PSORT
Lj0g3v0040139.1 mito 8.5, cyto_mito 5, nucl 2, chlo 1, cyto 1, golg 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0040139.1 |
|