Miyakogusa Predicted Gene
- Lj0g3v0040109.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SH39_LOTJA |
165 |
85.9 |
85.9 |
(tr|I3SH39) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT5G18050.1 |
102 |
71.4 |
87.3 |
| Symbols: | SAUR-like auxin-responsive protein family | chr5:5974691-5974963 REVERSE LENGTH=90 |
| Medicago |
Medtr4g072500.1 |
141 |
72.8 |
79.3 |
| SAUR-like auxin-responsive family protein | HC | chr4:27479145-27478774 | 20130731 |
| Soybean |
Glyma09g35350.1 |
144 |
76.7 |
80.0 |
|
| LJGI |
gnl|LJGI|GO028197 |
553 |
100.0 |
100.0 |
similar to UniRef100_P33083 Cluster: Auxin-induced protein 6B; n=1; Glycine max|Rep: Auxin-induced protein 6B - Glycine max (Soybean), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0040109.1 |
length: 92 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
1.1e-31 |
14-89 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
1.8e-30 |
27-90 |
| Seg |
seg |
seg |
NA |
15-27 |
- Wolf-PSORT
Lj0g3v0040109.1 mito 5, nucl 4.5, chlo 3, cyto_nucl 3, mito_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0040109.1 |
|