Miyakogusa Predicted Gene
- Lj0g3v0039999.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LFD1_SOYBN |
103 |
92.3 |
100.0 |
(tr|K7LFD1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G21200.1 |
84.3 |
68.5 |
85.2 |
| Symbols: | SAUR-like auxin-responsive protein family | chr2:9084039-9084299 REVERSE LENGTH=86 |
| Medicago |
Medtr4g072310.1 |
99.0 |
88.5 |
96.2 |
| SAUR-like auxin-responsive family protein | HC | chr4:27425718-27425999 | 20130731 |
| Soybean |
Glyma09g35500.1 |
104 |
92.3 |
100.0 |
|
| LJGI |
gnl|LJGI|GO028197 |
202 |
91.1 |
91.1 |
similar to UniRef100_P33083 Cluster: Auxin-induced protein 6B; n=1; Glycine max|Rep: Auxin-induced protein 6B - Glycine max (Soybean), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0039999.1 |
length: 65 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
1.4e-22 |
13-62 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
9.3e-21 |
19-63 |
- Wolf-PSORT
Lj0g3v0039999.1 pero 3, nucl 2, cyto 2, mito 2, cyto_nucl 2, chlo 1, extr 1, vacu 1, E.R. 1, golg 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0039999.1 |
|