Miyakogusa Predicted Gene

Lj0g3v0038999.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SV60_LOTJA 556 90.0 90.0 (tr|I3SV60) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G07950.1 375 69.6 82.6 | Symbols: | rhomboid protein-related | chr3:2531982-2534277 FORWARD LENGTH=304
Medicago Medtr1g095490.1 432 75.2 85.4 | transmembrane protein, putative | HC | chr1:42949667-42953031 | 20130731
Soybean Glyma02g07160.1 475 85.9 91.5  
LJGI gnl|LJGI|TC69767 1836 99.9 99.9 similar to UniRef100_A7PI64 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0038999.1 length: 309 aa.
IPR013861 Protein of unknown function DUF1751, integral membrane, eukaryotic
method AccNumber shortName E-value location
HMMPfam PF08551 DUF1751 2.1e-31 49-147
IPR022764 Peptidase S54, rhomboid domain
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 0.00057 21-177
no_ID  
HMMPanther PTHR13377 PLACENTAL 9.4e-109 14-291
HMMPanther PTHR13377:SF3 SUBFAMILY 9.4e-109 14-291
Seg seg seg NA 271-300
superfamily SSF144091 Rhomboid-like 7.4e-11 13-208
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 30
38 60
68 90
97 119
162 184
Wolf-PSORT
Lj0g3v0038999.1	plas 8, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0038999.1 Not targeted -32.303 0 -6.306 35.54% -25.997