Miyakogusa Predicted Gene
- Lj0g3v0036869.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3ST28_LOTJA |
220 |
89.5 |
89.5 |
(tr|I3ST28) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G30845.1 |
108 |
58.0 |
69.6 |
| Symbols: | unknown protein; Has 120 Blast hits to 120 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 37; Plants - 23; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | chr1:10979856-10980427 FORWARD LENGTH=118 |
| Medicago |
Medtr8g085700.1 |
157 |
66.9 |
71.8 |
| nodulin MtN21/EamA-like transporter family protein | HC | chr8:35527762-35525750 | 20130731 |
| Soybean |
Glyma08g12010.1 |
179 |
81.8 |
85.5 |
|
| LJGI |
gnl|LJGI|TC76996 |
652 |
98.9 |
98.9 |
similar to UniRef100_A7NT04 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0036869.1 |
length: 124 aa. |
| IPR000620 |
Drug/metabolite transporter |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF00892 |
EamA |
7.8e-08 |
34-113 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
100-112 |
| superfamily |
SSF103481 |
Multidrug |
9.6e-08 |
17-120 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
19 |
41 |
| 44 |
66 |
| 68 |
90 |
| 95 |
117 |
- Wolf-PSORT
Lj0g3v0036869.1 chlo 3, E.R. 3, cyto 2, mito 2, plas 2, E.R._vacu 2, mito_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0036869.1 |
|