Miyakogusa Predicted Gene
- Lj0g3v0036799.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KQG1_SOYBN |
892 |
86.2 |
91.4 |
(tr|K7KQG1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G38500.1 |
719 |
69.1 |
79.3 |
| Symbols: | Protein of unknown function (DUF616) | chr4:18008418-18010693 FORWARD LENGTH=499 |
| Medicago |
Medtr8g085850.2 |
891 |
85.1 |
90.8 |
| plant/F20M13-60 protein | HC | chr8:35596566-35600550 | 20130731 |
| Soybean |
Glyma05g28910.1 |
816 |
86.0 |
91.2 |
|
| LJGI |
gnl|LJGI|GO011298 |
948 |
99.8 |
99.8 |
weakly similar to UniRef100_A7P8F8 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0036799.1 |
length: 500 aa. |
| IPR006852 |
Protein of unknown function DUF616 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04765 |
DUF616 |
6.6e-131 |
139-445 |
| no_ID |
|
| HMMPanther |
PTHR12956 |
ALKALINE |
3.4e-263 |
1-500 |
| HMMPanther |
PTHR12956:SF2 |
UNCHARACTERIZED |
3.4e-263 |
1-500 |
| Seg |
seg |
seg |
NA |
56-76 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
54 |
76 |
| 192 |
214 |
- Wolf-PSORT
Lj0g3v0036799.1 cyto 5, nucl 4, vacu 2, E.R. 2, cysk_nucl 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0036799.1 |
|