Miyakogusa Predicted Gene
- Lj0g3v0036679.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NIS4_SOYBN |
249 |
96.0 |
97.6 |
(tr|I1NIS4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G18480.1 |
234 |
78.9 |
85.7 |
| Symbols: PGSIP6 | plant glycogenin-like starch initiation protein 6 | chr5:6131307-6133787 REVERSE LENGTH=537 |
| Medicago |
Medtr1g080460.1 |
246 |
81.7 |
86.9 |
| glucuronosyltransferase PGSIP8 | HC | chr1:35796648-35801186 | 20130731 |
| Soybean |
Glyma20g37000.1 |
249 |
96.0 |
97.6 |
|
| LJGI |
gnl|LJGI|TC64717 |
910 |
100.0 |
100.0 |
similar to UniRef100_A7QMT7 Cluster: Chromosome chr14 scaffold_128, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_128, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0036679.1 |
length: 153 aa. |
| IPR002495 |
Glycosyl transferase, family 8 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016757 |
transferase activity, transferring glycosyl groups |
|
|
| HMMPfam |
PF01501 |
Glyco_transf_8 |
3e-16 |
34-136 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.550.10 |
no description |
8.2e-40 |
27-153 |
| HMMPanther |
PTHR11183 |
GLYCOGENIN |
5.2e-80 |
8-153 |
| HMMPanther |
PTHR11183:SF7 |
GLYCOGENIN |
5.2e-80 |
8-153 |
| Seg |
seg |
seg |
NA |
22-27 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
3.9e-28 |
27-142 |
- Wolf-PSORT
Lj0g3v0036679.1 extr 6, cyto 3, chlo 1, mito 1, plas 1, vacu 1, golg 1, chlo_mito 1, golg_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0036679.1 |
Not targeted |
-27.791 |
-0.097 |
-4.109 |
25.98% |
-23.584
|