Miyakogusa Predicted Gene
- Lj0g3v0035939.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A5BB30_VITVI |
90.1 |
33.7 |
47.9 |
(tr|A5BB30) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025162 PE=4 SV=1 |
| TAIR_pep |
AT4G23160.1 |
62.4 |
42.9 |
61.4 |
| Symbols: CRK8 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | chr4:12129485-12134086 FORWARD LENGTH=1262 |
| Medicago |
Medtr3g093120.1 |
64.7 |
42.3 |
63.4 |
| SPFH domain/band 7 family protein | LC | chr3:42570339-42574091 | 20130731 |
| Soybean |
Glyma18g38660.1 |
87.0 |
57.1 |
72.9 |
|
| LJGI |
gnl|LJGI|BW594844 |
854 |
98.3 |
98.3 |
weakly similar to UniRef100_Q9FIC5 Cluster: Retroelement pol polyprotein-like; n=2; Arabidopsis thaliana|Rep: Retroelement pol polyprotein-like - Arabidopsis thaliana (Mouse-ear cress), partial (4%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0035939.1 |
length: 169 aa. |
| IPR025724 |
GAG-pre-integrase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF13976 |
gag_pre-integrs |
9.7e-07 |
74-109 |
| no_ID |
|
| HMMPanther |
PTHR11439 |
GAG-POL-RELATED |
3.6e-19 |
100-169 |
| HMMPanther |
PTHR11439:SF127PREDICTED |
PROTEIN |
3.6e-19 |
100-169 |
- Wolf-PSORT
Lj0g3v0035939.1 nucl 7, cyto 3, chlo 1, mito 1, extr 1, chlo_mito 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0035939.1 |
|