Miyakogusa Predicted Gene
- Lj0g3v0035849.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S150_LOTJA |
170 |
100.0 |
100.0 |
(tr|I3S150) Proteasome subunit beta type OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G21720.1 |
160 |
90.2 |
96.3 |
| Symbols: PBC1 | proteasome beta subunit C1 | chr1:7626394-7628070 FORWARD LENGTH=204 |
| Medicago |
Medtr7g088490.1 |
162 |
92.7 |
97.6 |
| proteasome beta type-3 subunit | HC | chr7:34472184-34477524 | 20130731 |
| Soybean |
Glyma13g10130.1 |
166 |
95.1 |
98.8 |
|
| LJGI |
gnl|LJGI|TC63776 |
488 |
100.0 |
100.0 |
homologue to UniRef100_Q9XI05-2 Cluster: Isoform 2 of Q9XI05 ; n=1; Arabidopsis thaliana|Rep: Isoform 2 of Q9XI05 - Arabidopsis thaliana (Mouse-ear cress), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0035849.1 |
length: 82 aa. |
| IPR001353 |
Proteasome, subunit alpha/beta |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004298 |
threonine-type endopeptidase activity |
|
|
| Cellular Component |
GO:0005839 |
proteasome core complex |
|
|
| Biological Process |
GO:0051603 |
proteolysis involved in cellular protein catabolic process |
|
|
| HMMPfam |
PF00227 |
Proteasome |
1.3e-16 |
7-82 |
| IPR016050 |
Proteasome, beta-type subunit, conserved site |
| Molecular Function |
GO:0004175 |
endopeptidase activity |
|
|
| Cellular Component |
GO:0005839 |
proteasome core complex |
|
|
| Biological Process |
GO:0051603 |
proteolysis involved in cellular protein catabolic process |
|
|
| PatternScan |
PS00854 |
PROTEASOME_B_1 |
NA |
12-59 |
| IPR023333 |
Proteasome B-type subunit |
| Molecular Function |
GO:0004298 |
threonine-type endopeptidase activity |
|
|
| ProfileScan |
PS51476 |
PROTEASOME_B_2 |
21.245 |
8-82 |
| no_ID |
|
| Gene3D |
G3DSA:3.60.20.10 |
no description |
1.2e-22 |
2-82 |
| HMMPanther |
PTHR11599 |
PROTEASOME |
1e-43 |
1-82 |
| HMMPanther |
PTHR11599:SF7 |
PROTEASOME |
1e-43 |
1-82 |
| superfamily |
SSF56235 |
N-terminal |
5.7e-19 |
2-82 |
- Wolf-PSORT
Lj0g3v0035849.1 cyto 7.5, cyto_E.R. 4.5, chlo 4, nucl 1, plas 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0035849.1 |
|