Miyakogusa Predicted Gene

Lj0g3v0035779.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N7X6_SOYBN 609 69.8 79.5 (tr|I1N7X6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G77405.1 550 58.0 75.7 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:29087145-29088521 FORWARD LENGTH=458
Medicago Medtr3g108060.1 545 61.3 74.1 | PPR containing plant-like protein | HC | chr3:49927588-49930323 | 20130731
Soybean Glyma19g27190.1 599 69.5 79.3  
LJGI gnl|LJGI|TC79017 2163 99.5 99.5 similar to UniRef100_A7PHB6 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0035779.1 length: 441 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0086 352-379
HMMPfam PF13041 PPR_2 1.8e-19 194-245
277-324
HMMPfam PF13812 PPR_3 0.027 162-194
HMMTigr TIGR00756 PPR: 9.7e-05 163-196
198-223
280-313
315-344
352-383
ProfileScan PS51375 PPR 10.446 195-229
160-194
232-267
278-312
313-347
349-383
no_ID  
HMMPanther PTHR24015 FAMILY 2.5e-66 100-400
HMMPanther PTHR24015:SF0 SUBFAMILY 2.5e-66 100-400
Wolf-PSORT
Lj0g3v0035779.1	chlo 11, cyto 1, E.R. 1, pero 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0035779.1