Miyakogusa Predicted Gene

Lj0g3v0033079.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JWX7_SOYBN 979 72.8 82.0 (tr|I1JWX7) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G47780.1 731 56.2 70.2 | Symbols: ATATH6, ATH6 | ABC2 homolog 6 | chr3:17624500-17628972 FORWARD LENGTH=935
Medicago Medtr3g437870.1 1007 72.3 81.6 | ABC transporter A family protein | HC | chr3:12930672-12922696 | 20130731
Soybean Glyma04g34130.1 979 72.8 82.0  
LJGI gnl|LJGI|TC66696 1392 100.0 100.0 weakly similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0033079.1 length: 673 aa.
IPR026082 ABC transporter A, ABCA
method AccNumber shortName E-value location
HMMPanther PTHR19229 ATP-BINDING 4.6e-267 8-673
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.8e-08 633-673
no_ID  
Gene3D G3DSA:3.40.50.300 no description 6.3e-05 630-673
HMMPanther PTHR19229:SF7 ABC 4.6e-267 8-673
HMMPfam PF12698 ABC2_membrane_3 3e-14 268-546
Seg seg seg NA 48-61
448-458
472-485
Putative transmembrane regions
  From To
TM segments
SOSUI		 35 57
351 373
403 425
432 454
458 480
540 562
Wolf-PSORT
Lj0g3v0033079.1	plas 10, vacu 2, nucl 1, golg 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0033079.1