Miyakogusa Predicted Gene

Lj0g3v0033019.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MNT9_SOYBN 928 75.6 83.4 (tr|I1MNT9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G54385.2 541 52.5 67.3 | Symbols: | ARM repeat superfamily protein | chr1:20301289-20303048 REVERSE LENGTH=560
Medicago Medtr6g032885.1 868 71.9 82.6 | ARM repeat protein | HC | chr6:10224831-10221378 | 20130731
Soybean Glyma16g26890.1 884 73.1 80.5  
LJGI gnl|LJGI|TC59882 355 82.1 82.1 similar to UniRef100_A7PW59 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0033019.2 length: 598 aa.
IPR007022 Survival motor neuron interacting protein 1
method AccNumber shortName E-value location
Biological Process GO:0000245 spliceosomal complex assembly    
Biological Process GO:0000398 mRNA splicing, via spliceosome    
HMMPanther PTHR12794 GEMIN2 5.2e-67 2-284
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 7.1e-07 234-291
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 7.5e-10 7-290
no_ID  
HMMPanther PTHR12794:SF0 SUBFAMILY 5.2e-67 2-284
Seg seg seg NA 138-150
Putative transmembrane regions
  From To
TM segments
SOSUI		 568 586
Wolf-PSORT
Lj0g3v0033019.2	nucl 6, chlo 4, golg 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0033019.2