Miyakogusa Predicted Gene
- Lj0g3v0032569.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
G7IWF3_MEDTR |
211 |
44.0 |
56.0 |
(tr|G7IWF3) PHD-finger family protein expressed OS=Medicago truncatula GN=MTR_3g025330 PE=4 SV=1 |
TAIR_pep |
AT3G02890.1 |
57.8 |
42.0 |
64.0 |
| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr3:640828-645303 FORWARD LENGTH=994 |
Medicago |
Medtr3g025330.1 |
215 |
44.0 |
58.0 |
| RING/FYVE/PHD zinc finger protein, putative | HC | chr3:7740950-7733410 | 20130731 |
Soybean |
Glyma04g32480.1 |
95.5 |
55.2 |
71.9 |
|
LJGI |
gnl|LJGI|FS323748 |
944 |
99.8 |
99.8 |
weakly similar to UniRef100_A9SNJ7 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0032569.1 |
length: 402 aa. |
IPR011011 |
Zinc finger, FYVE/PHD-type |
method |
AccNumber |
shortName |
E-value |
location |
superfamily |
SSF57903 |
FYVE/PHD |
2.2e-06 |
8-69 |
IPR013083 |
Zinc finger, RING/FYVE/PHD-type |
Gene3D |
G3DSA:3.30.40.10 |
no description |
8e-05 |
15-64 |
no_ID |
|
Seg |
seg |
seg |
NA |
359-368 |
- Wolf-PSORT
Lj0g3v0032569.1 nucl 10, cyto 1, plas 1, extr 1, cysk 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0032569.1 |
|