Miyakogusa Predicted Gene
- Lj0g3v0027059.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LRA0_SOYBN |
285 |
72.6 |
77.1 |
(tr|K7LRA0) Uncharacterized protein (Fragment) OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT1G70530.1 |
82.8 |
28.4 |
46.8 |
| Symbols: CRK3 | cysteine-rich RLK (RECEPTOR-like protein kinase) 3 | chr1:26588750-26591379 REVERSE LENGTH=646 |
| Medicago |
Medtr3g064080.1 |
271 |
71.5 |
76.0 |
| cysteine-rich RLK (receptor-like kinase) protein | HC | chr3:28814374-28821403 | 20130731 |
| Soybean |
Glyma18g05250.1 |
244 |
60.0 |
68.5 |
|
| LJGI |
gnl|LJGI|FS337973 |
236 |
94.3 |
94.3 |
similar to UniRef100_A7PTN0 Cluster: Chromosome undetermined scaffold_30, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_30, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0027059.1 |
length: 210 aa. |
| IPR002902 |
Gnk2-homologous domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01657 |
Stress-antifung |
3.4e-13 |
7-99 |
| ProfileScan |
PS51473 |
GNK2 |
14.389 |
1-99 |
| IPR011009 |
Protein kinase-like domain |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
6.1e-06 |
171-202 |
| IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
| Gene3D |
G3DSA:2.60.120.200 |
no description |
3.3e-13 |
113-198 |
| no_ID |
|
| HMMPanther |
PTHR24420 |
FAMILY |
3.3e-19 |
90-198 |
| Seg |
seg |
seg |
NA |
115-140 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
121 |
143 |
- Wolf-PSORT
Lj0g3v0027059.1 chlo 5, extr 5, vacu 2, mito 1, plas 1, E.R._vacu 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0027059.1 |
|