Miyakogusa Predicted Gene

Lj0g3v0024609.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MGE2_SOYBN 1193 80.1 88.5 (tr|K7MGE2) Cytosine-specific methyltransferase OS=Glycine max PE=3 SV=1
TAIR_pep AT4G19020.1 963 58.6 74.5 | Symbols: CMT2 | chromomethylase 2 | chr4:10414526-10420936 FORWARD LENGTH=1295
Medicago Medtr8g071100.1 1283 66.5 76.6 | DNA (cytosine-5)-methyltransferase | HC | chr8:30158575-30171725 | 20130731
Soybean Glyma16g17720.1 1046 73.1 80.6  
LJGI gnl|LJGI|TC68930 969 100.0 100.0 similar to UniRef100_Q94F87 Cluster: DNA (cytosine-5)-methyltransferase CMT2; n=1; Arabidopsis thaliana|Rep: DNA (cytosine-5)-methyltransferase CMT2 - Arabidopsis thaliana (Mouse-ear cress), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0024609.2 length: 938 aa.
IPR000953 Chromo domain/shadow
method AccNumber shortName E-value location
HMMSmart SM00298 Chromatin 8.8e-08 459-518
ProfileScan PS50013 CHROMO_2 11.942 460-516
IPR001025 Bromo adjacent homology (BAH) domain
Molecular Function GO:0003677 DNA binding    
HMMPfam PF01426 BAH 3.9e-10 208-321
HMMSmart SM00439 Bromo 1.8e-17 205-321
ProfileScan PS51038 BAH 17.854 205-321
IPR001525 C-5 cytosine methyltransferase
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006306 DNA methylation    
Molecular Function GO:0008168 methyltransferase activity    
FPrintScan PR00105 C5METTRFRASE 8.8e-11 352-368
573-587
619-632
HMMPanther PTHR10629 CYTOSINE-SPECIFIC 1e-181 154-922
HMMPfam PF00145 DNA_methylase 2.4e-35 523-884
HMMTigr TIGR00675 dcm: 9.3e-32 527-883
IPR016197 Chromo domain-like
superfamily SSF54160 Chromo 9.7e-14 447-526
IPR018117 DNA methylase, C-5 cytosine-specific, active site
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006306 DNA methylation    
PatternScan PS00094 C5_MTASE_1 NA 530-542
IPR023780 Chromo domain
HMMPfam PF00385 Chromo 1e-10 462-514
IPR025821 DNA (cytosine-5-)-methyltransferase, plant
ProfileScan PS51617 SAM_MT_C5_2 328.452 124-925
no_ID  
Gene3D G3DSA:2.40.50.40 no description 6.9e-13 456-517
Gene3D G3DSA:3.40.50.150 no description 2.5e-53 518-710
Gene3D G3DSA:3.90.120.10 no description 4.1e-08 827-872
HMMPanther PTHR10629:SF10 DNA 1e-181 154-922
Seg seg seg NA 180-194
superfamily SSF53335 S-adenosyl-L-methionine-dependent 4.2e-72 349-884
Wolf-PSORT
Lj0g3v0024609.2	chlo 6, mito 3.5, nucl 3, cyto_mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0024609.2