Miyakogusa Predicted Gene
- Lj0g3v0024519.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q05JX9_LOTJA |
590 |
100.0 |
100.0 |
(tr|Q05JX9) Pinoresinol-lariciresinol reductase homolog OS=Lotus japonicus GN=R5 PE=2 SV=1 |
| TAIR_pep |
AT1G32100.1 |
406 |
65.7 |
82.5 |
| Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 | chr1:11546472-11547953 REVERSE LENGTH=317 |
| Medicago |
Medtr8g071130.1 |
536 |
89.2 |
95.8 |
| pinoresinol-lariciresinol reductase-like protein | HC | chr8:30182726-30180712 | 20130731 |
| Soybean |
Glyma16g17680.1 |
525 |
86.8 |
94.4 |
|
| LJGI |
gnl|LJGI|TC57202 |
1707 |
100.0 |
100.0 |
UniRef100_Q05JX9 Cluster: Pinoresinol-lariciresinol reductase homolog; n=1; Lotus japonicus|Rep: Pinoresinol-lariciresinol reductase homolog - Lotus japonicus, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0024519.1 |
length: 287 aa. |
| IPR008030 |
NmrA-like |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05368 |
NmrA |
2.2e-79 |
6-242 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
7.2e-12 |
2-87 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.25.10 |
no description |
7.3e-34 |
157-281 |
| HMMPanther |
PTHR10366 |
NAD |
1.5e-115 |
2-254 |
| HMMPanther |
PTHR10366:SF135SUBFAMILY |
NOT |
1.5e-115 |
2-254 |
| superfamily |
SSF51735 |
NAD(P)-binding |
6.7e-62 |
1-273 |
- Wolf-PSORT
Lj0g3v0024519.1 cyto 5.5, cyto_E.R. 4, chlo 2, E.R. 1.5, chlo_mito 1.5, nucl 1, mito 1, plas 1, cysk 1, golg 1, cysk_nucl 1, nucl_plas 1, golg_plas 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0024519.1 |
|