Miyakogusa Predicted Gene
- Lj0g3v0023589.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IG53_MEDTR |
209 |
77.0 |
81.5 |
(tr|G7IG53) Zn/Cd P(IB)-type ATPase OS=Medicago truncatula GN=MTR_2g036380 PE=3 SV=1 |
| TAIR_pep |
AT4G30110.1 |
152 |
58.1 |
69.9 |
| Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | chr4:14720253-14724577 REVERSE LENGTH=951 |
| Medicago |
Medtr2g036380.2 |
209 |
77.0 |
81.5 |
| heavy metal ATPase transporter | HC | chr2:15750414-15755711 | 20130731 |
| Soybean |
Glyma09g06170.1 |
201 |
75.0 |
80.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0023589.1 |
length: 135 aa. |
| IPR001757 |
Cation-transporting P-type ATPase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006812 |
cation transport |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0019829 |
cation-transporting ATPase activity |
|
|
| HMMPanther |
PTHR24093 |
FAMILY |
3e-63 |
1-135 |
| HMMTigr |
TIGR01494 |
ATPase_P-type: |
2.2e-20 |
9-127 |
| IPR008250 |
P-type ATPase, A domain |
| Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
| Molecular Function |
GO:0046872 |
metal ion binding |
|
|
| HMMPfam |
PF00122 |
E1-E2_ATPase |
7.8e-13 |
2-98 |
| IPR018303 |
P-type ATPase, phosphorylation site |
| PatternScan |
PS00154 |
ATPASE_E1_E2 |
NA |
108-114 |
| IPR023214 |
HAD-like domain |
| Gene3D |
G3DSA:3.40.50.1000 |
no description |
3.2e-08 |
81-122 |
| superfamily |
SSF56784 |
HAD-like |
2e-06 |
93-117 |
| IPR027265 |
Divalent cation-transporting P-type ATPase |
| Biological Process |
GO:0006812 |
cation transport |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0019829 |
cation-transporting ATPase activity |
|
|
| HMMPanther |
PTHR24093:SF126SUBFAMILY |
NOT |
3e-63 |
1-135 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
28-44 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
23 |
45 |
| 48 |
70 |
| 73 |
95 |
- Wolf-PSORT
Lj0g3v0023589.1 vacu 9, plas 2, golg 2, golg_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0023589.1 |
|