Miyakogusa Predicted Gene

Lj0g3v0020909.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KWB3_SOYBN 1029 80.2 89.2 (tr|I1KWB3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G29230.1 753 59.7 76.6 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:11188803-11190605 FORWARD LENGTH=600
Medicago Medtr7g011840.1 903 71.9 83.9 | PPR containing plant-like protein | HC | chr7:3275571-3278623 | 20130731
Soybean Glyma08g26270.2 1029 80.2 89.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0020909.1 length: 602 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00057 187-216
218-247
353-377
454-479
HMMPfam PF13041 PPR_2 6.1e-11 80-128
277-316
379-426
HMMTigr TIGR00756 PPR: 0.0009 187-218
218-248
249-273
280-313
382-415
417-450
455-478
ProfileScan PS51375 PPR 6.489 81-116
216-250
185-215
152-184
278-312
251-277
348-378
313-347
380-414
415-450
451-481
517-551
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.9e-06 453-536
no_ID  
HMMPanther PTHR24015 FAMILY 6.8e-295 35-601
HMMPanther PTHR24015:SF82 SUBFAMILY 6.8e-295 35-601
Seg seg seg NA 559-566
Wolf-PSORT
Lj0g3v0020909.1	chlo 6, mito 6, chlo_mito 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0020909.1