Miyakogusa Predicted Gene

Lj0g3v0020189.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K392_SOYBN 998 67.5 78.0 (tr|K7K392) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G33060.1 340 34.0 51.0 | Symbols: AtRLP27, RLP27 | receptor like protein 27 | chr2:14025661-14028087 FORWARD LENGTH=808
Medicago Medtr4g017600.1 974 65.8 77.7 | verticillium wilt disease resistance protein | HC | chr4:5499964-5503317 | 20130731
Soybean Glyma01g29030.1 722 58.2 68.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0020189.1 length: 765 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.26 6-26
29-52
104-123
324-341
347-363
610-630
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.8e-27 3-163
173-284
285-465
559-672
HMMPanther PTHR24420 FAMILY 5.3e-117 11-728
HMMPfam PF13504 LRR_7 7.2 77-90
HMMPfam PF13516 LRR_6 0.23 392-415
HMMPfam PF13855 LRR_8 8.7e-07 179-237
Seg seg seg NA 709-719
superfamily SSF52058 L 7.5e-44 269-676
2-267
Putative transmembrane regions
  From To
TM segments
SOSUI		 703 724
Wolf-PSORT
Lj0g3v0020189.1	golg 4, cyto 3, nucl 2, E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0020189.1