| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | C6T8C8_SOYBN | 192 | 97.8 | 100.0 | (tr|C6T8C8) Putative uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep | AT3G13570.1 | 171 | 86.7 | 94.4 | | Symbols: SCL30A, At-SCL30A | SC35-like splicing factor 30A | chr3:4429564-4431602 REVERSE LENGTH=262 |
| Medicago | Medtr3g083550.1 | 191 | 95.6 | 98.9 | | RNA recognition motif, a.k.a. RRM, RBD protein | HC | chr3:37716900-37714302 | 20130731 |
| Soybean | Glyma02g38540.1 | 192 | 97.8 | 100.0 | |
| LJGI | gnl|LJGI|TC68993 | 1528 | 100.0 | 100.0 | homologue to UniRef100_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%) |
| Lj0g3v0020069.1 | length: 256 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 3.8e-20 | 49-118 |
| HMMSmart | SM00360 | RNA | 1.7e-21 | 48-121 |
| ProfileScan | PS50102 | RRM | 17.387 | 47-125 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 1.4e-25 | 30-131 |
| no_ID | ||||
| HMMPanther | PTHR23147 | SERINE/ARGININE | 1e-70 | 8-255 |
| Seg | seg | seg | NA | 2-43 134-184 186-217 |
| superfamily | SSF54928 | RNA-binding | 1.4e-27 | 46-157 |
Lj0g3v0020069.1 nucl 12, chlo 1, plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0020069.1 |