Miyakogusa Predicted Gene
- Lj0g3v0018479.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SFD4_LOTJA |
95.1 |
82.1 |
85.7 |
(tr|I3SFD4) Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G58710.1 |
89.0 |
75.0 |
83.9 |
| Symbols: ROC7 | rotamase CYP 7 | chr5:23717840-23719495 FORWARD LENGTH=204 |
| Medicago |
Medtr3g463900.1 |
93.2 |
80.4 |
85.7 |
| peptidyl-prolyl cis-trans isomerase | HC | chr3:25644296-25640419 | 20130731 |
| Soybean |
Glyma18g07030.1 |
89.0 |
76.8 |
82.1 |
|
| LJGI |
gnl|LJGI|TC64874 |
278 |
100.0 |
100.0 |
similar to UniRef100_A7NYF4 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl cis-trans isomerase - Vitis vinifera (Grape), partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0018479.1 |
length: 76 aa. |
| IPR002130 |
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
|
|
| Biological Process |
GO:0006457 |
protein folding |
|
|
| HMMPfam |
PF00160 |
Pro_isomerase |
2.2e-09 |
24-72 |
| ProfileScan |
PS50072 |
CSA_PPIASE_2 |
9.990 |
1-73 |
| superfamily |
SSF50891 |
Cyclophilin-like |
5.7e-12 |
30-74 |
| no_ID |
|
| Gene3D |
G3DSA:2.40.100.10 |
no description |
6.8e-12 |
24-74 |
| HMMPanther |
PTHR11071 |
PEPTIDYL-PROLYL |
1.4e-15 |
30-74 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
19 |
- Wolf-PSORT
Lj0g3v0018479.1 chlo 4, extr 4, cyto 2, mito 2, nucl 1, vacu 1, cyto_mito 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0018479.1 |
|