Miyakogusa Predicted Gene
- Lj0g3v0018339.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LLK1_SOYBN |
267 |
84.8 |
91.4 |
(tr|I1LLK1) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G58720.1 |
196 |
63.6 |
76.2 |
| Symbols: | smr (Small MutS Related) domain-containing protein | chr5:23719976-23722974 REVERSE LENGTH=519 |
| Medicago |
Medtr3g463770.1 |
263 |
81.3 |
89.3 |
| Smr (small MutS-related) domain protein | HC | chr3:25561469-25569460 | 20130731 |
| Soybean |
Glyma18g07040.1 |
264 |
82.8 |
90.7 |
|
| LJGI |
gnl|LJGI|TC60364 |
955 |
99.4 |
99.4 |
similar to UniRef100_A7NYF6 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0018339.1 |
length: 164 aa. |
| IPR002625 |
Smr protein/MutS2 C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01713 |
Smr |
4e-06 |
109-163 |
| HMMSmart |
SM00463 |
Small |
0.0013 |
106-164 |
| ProfileScan |
PS50828 |
SMR |
14.180 |
109-164 |
| IPR013899 |
Domain of unknown function DUF1771 |
| HMMPfam |
PF08590 |
DUF1771 |
5.7e-17 |
36-101 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
152-163 |
- Wolf-PSORT
Lj0g3v0018339.1 mito 6, nucl 3, cyto_mito 3, chlo 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0018339.1 |
|