Miyakogusa Predicted Gene

Lj0g3v0018079.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7J0S1_MEDTR 311 72.7 81.5 (tr|G7J0S1) Gamma-interferon-inducible lysosomal thiol reductase OS=Medicago truncatula GN=MTR_3g031800 PE=4 SV=1
TAIR_pep AT1G07080.1 266 67.4 82.3 | Symbols: | Thioredoxin superfamily protein | chr1:2170069-2171861 FORWARD LENGTH=265
Medicago Medtr3g031800.1 311 72.7 81.5 | gamma interferon inducible lysosomal thiol reductase | HC | chr3:26600300-26596764 | 20130731
Soybean Glyma11g29350.1 306 75.5 83.7  
LJGI gnl|LJGI|TC60289 1203 100.0 100.0 similar to UniRef100_A7NYA2 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0018079.1 length: 236 aa.
IPR004911 Gamma interferon inducible lysosomal thiol reductase GILT
method AccNumber shortName E-value location
HMMPanther PTHR13234 GAMMA-INTERFERON 2e-96 1-229
HMMPfam PF03227 GILT 4.1e-30 37-143
IPR012336 Thioredoxin-like fold
Gene3D G3DSA:3.40.30.10 no description 0.00046 31-201
superfamily SSF52833 Thioredoxin-like 4.5e-07 18-204
no_ID  
HMMPanther PTHR13234:SF6 GAMMA 2e-96 1-229
Seg seg seg NA 2-26
30-35
Putative transmembrane regions
  From To
TM segments
SOSUI
2 23
39 61
Wolf-PSORT
Lj0g3v0018079.1	extr 7, vacu 5, chlo 1, mito 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0018079.1 Not targeted -64.339 -0.017 -11.920 92.57% -52.402