Miyakogusa Predicted Gene

Lj0g3v0017229.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7K8V8_MEDTR 163 65.0 71.5 (tr|G7K8V8) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g059030 PE=4 SV=1

TAIR_pep AT4G08240.1 121 51.8 62.8 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:5194713-5195756 FORWARD LENGTH=136

Medicago Medtr5g059030.1 163 65.0 71.5 | hypothetical protein | HC | chr5:24360933-24359463 | 20130731

Soybean Glyma14g33130.1 161 65.9 73.9

LJGI gnl|LJGI|BP041792 422 99.1 99.1 similar to UniRef100_A7NV99 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0017229.2 length: 162 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 116-137

Seg seg seg NA 4-12
14-25
38-50

Wolf-PSORT

Lj0g3v0017229.2 nucl 10, chlo 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0017229.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7K8V8_MEDTR	163	65.0	71.5	(tr\|G7K8V8) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g059030 PE=4 SV=1
TAIR_pep	AT4G08240.1	121	51.8	62.8	\| Symbols: \| unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:5194713-5195756 FORWARD LENGTH=136
Medicago	Medtr5g059030.1	163	65.0	71.5	\| hypothetical protein \| HC \| chr5:24360933-24359463 \| 20130731
Soybean	Glyma14g33130.1	161	65.9	73.9
LJGI	gnl\|LJGI\|BP041792	422	99.1	99.1	similar to UniRef100_A7NV99 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%)

no_ID
Lj0g3v0017229.2				length: 162 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	116-137
Seg	seg	seg	NA	4-12 14-25 38-50