Miyakogusa Predicted Gene

Lj0g3v0014579.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5WCF3_PRUPE 495 59.5 76.3 (tr|M5WCF3) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019526mg PE=4 SV=1
TAIR_pep AT3G11840.1 317 39.6 58.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-3738250 REVERSE LENGTH=470
Medicago Medtr1g056910.1 578 68.1 79.9 | E3 ubiquitin-protein ligase PUB23-like protein | HC | chr1:24921825-24920395 | 20130731
Soybean Glyma02g35440.1 512 65.1 77.7  
LJGI gnl|LJGI|TC58406 1437 100.0 100.0 similar to UniRef100_A7QHS6 Cluster: Chromosome chr8 scaffold_99, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_99, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0014579.1 length: 422 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 1.3e-17 7-80
HMMSmart SM00504 Modified 1.2e-29 10-78
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.6e-10 68-399
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.7e-27 5-67
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.1e-09 97-400
no_ID  
HMMPanther PTHR13931 UBIQUITINATION 6.6e-45 3-102
HMMPanther PTHR13931:SF12 SUBFAMILY 6.6e-45 3-102
Seg seg seg NA 103-111
superfamily SSF57850 RING/U-box 3.4e-24 6-85
Wolf-PSORT
Lj0g3v0014579.1	cyto 9, nucl 2, vacu 1.5, cysk_nucl 1.5, E.R._vacu 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0014579.1