Miyakogusa Predicted Gene

Lj0g3v0014299.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LYM1_SOYBN 1801 72.9 80.0 (tr|I1LYM1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G18760.1 1389 60.2 69.7 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129154-8133502 FORWARD LENGTH=1187
Medicago Medtr1g069755.1 1784 71.9 79.3 | DNA repair and recombination protein RAD26 | HC | chr1:30420894-30427365 | 20130731
Soybean Glyma13g18650.1 1801 72.9 80.0  
LJGI gnl|LJGI|TC64434 803 99.8 99.8 similar to UniRef100_A7Q1R2 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0014299.1 length: 1237 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 7.7e-71 411-733
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 2e-13 787-865
HMMSmart SM00490 helicase 6.9e-20 782-865
ProfileScan PS51194 HELICASE_CTER 18.650 756-915
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 4.8e-29 404-636
ProfileScan PS51192 HELICASE_ATP_BIND_1 19.022 420-619
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.4e-68 397-669
671-918
no_ID  
Coil coil coiled-coil NA 123-174
1028-1049
Gene3D G3DSA:3.40.50.300 no description 1.1e-20 540-616
749-887
HMMPanther PTHR10799 SWI/SNF-RELATED 0 181-1052
HMMPanther PTHR10799:SF254SUBFAMILY NOT 0 181-1052
Seg seg seg NA 104-118
179-194
203-216
501-524
983-994
1110-1127
1184-1194
Wolf-PSORT
Lj0g3v0014299.1	nucl 9, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0014299.1