Miyakogusa Predicted Gene

Lj0g3v0013569.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K3I0_SOYBN 1055 61.2 72.2 (tr|K7K3I0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G05660.1 372 34.6 49.8 | Symbols: AtRLP33, RLP33 | receptor like protein 33 | chr3:1649258-1652001 REVERSE LENGTH=875
Medicago Medtr4g017700.1 1004 59.5 71.3 | verticillium wilt resistance-like protein | LC | chr4:5560232-5557050 | 20130731
Soybean Glyma03g07240.1 889 59.7 69.5  
LJGI gnl|LJGI|BP056473 507 99.6 99.6 similar to UniRef100_Q0I4F7 Cluster: Sulfate transporter; n=1; Haemophilus somnus 129PT|Rep: Sulfate transporter - Haemophilus, partial (2%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0013569.1 length: 899 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.62 140-162
187-207
284-301
ProfileScan PS51450 LRR 6.287 44-65
68-89
140-163
187-209
211-232
235-257
283-305
307-328
332-353
403-425
380-401
429-450
499-520
526-548
550-572
574-594
720-742
744-767
768-790
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 39 42-65
66-90
138-162
209-232
257-280
718-741
742-766
no_ID  
FPrintScan PR00019 LEURICHRPT 9.5e-06 284-297
742-755
Gene3D G3DSA:3.80.10.10 no description 1.4e-60 14-219
220-337
338-463
699-808
HMMPanther PTHR24420 FAMILY 8.7e-139 25-810
HMMPanther PTHR24420:SF480SUBFAMILY NOT 8.7e-139 25-810
HMMPfam PF13516 LRR_6 0.96 67-82
HMMPfam PF13855 LRR_8 4.1e-08 357-414
551-609
721-779
Seg seg seg NA 68-80
284-297
397-414
superfamily SSF52047 RNI-like 7.3e-29 356-611
superfamily SSF52058 L 5.7e-52 523-812
19-330
Putative transmembrane regions
  From To
TM segments
SOSUI		 838 859
Wolf-PSORT
Lj0g3v0013569.1	nucl 5, golg 4, chlo 1, cyto 1, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0013569.1