Miyakogusa Predicted Gene

Lj0g3v0012939.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JDD2_SOYBN 370 93.2 97.4 (tr|I1JDD2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G43190.2 336 84.3 91.6 | Symbols: PTB3 | polypyrimidine tract-binding protein 3 | chr1:16275432-16278185 REVERSE LENGTH=432
Medicago Medtr1g098530.2 347 87.4 93.7 | polypyrimidine tract-binding-like protein | HC | chr1:44364881-44358462 | 20130731
Soybean Glyma02g08870.1 370 93.2 97.4  
LJGI gnl|LJGI|TC73473 311 87.7 87.7 homologue to UniRef100_A7Q790 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0012939.1 length: 233 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
ProfileScan PS50102 RRM 8.859 1-78
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2.6e-26 16-85
99-196
no_ID  
HMMPanther PTHR11546 HETEROGENEOUS 7.4e-87 16-230
HMMPfam PF13893 RRM_5 6.8e-09 20-76
114-172
Seg seg seg NA 205-222
superfamily SSF54928 RNA-binding 1.5e-12 91-198
15-83
Wolf-PSORT
Lj0g3v0012939.1	chlo 12, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0012939.1