Miyakogusa Predicted Gene
- Lj0g3v0012429.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KD40_SOYBN |
934 |
89.6 |
93.2 |
(tr|I1KD40) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G18580.1 |
855 |
76.8 |
88.4 |
| Symbols: GAUT11 | galacturonosyltransferase 11 | chr1:6396144-6398005 FORWARD LENGTH=537 |
| Medicago |
Medtr4g109890.1 |
941 |
85.1 |
93.1 |
| CAZy family GT8 glycosyltransferase | HC | chr4:45726163-45729847 | 20130731 |
| Soybean |
Glyma06g22730.1 |
934 |
89.6 |
93.2 |
|
| LJGI |
gnl|LJGI|TC63952 |
781 |
86.5 |
86.5 |
similar to UniRef100_A7QHX5 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0012429.1 |
length: 535 aa. |
| IPR002495 |
Glycosyl transferase, family 8 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016757 |
transferase activity, transferring glycosyl groups |
|
|
| HMMPfam |
PF01501 |
Glyco_transf_8 |
1.1e-63 |
239-509 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.550.10 |
no description |
1.1e-72 |
331-532 |
| HMMPanther |
PTHR32116 |
FAMILY |
0 |
3-535 |
| HMMPanther |
PTHR32116:SF9 |
SUBFAMILY |
0 |
3-535 |
| Seg |
seg |
seg |
NA |
2-16 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
8.7e-72 |
230-535 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
17 |
39 |
- Wolf-PSORT
Lj0g3v0012429.1 mito 6.5, chlo 4, cyto_mito 4, plas 1, E.R. 1, golg 1, golg_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0012429.1 |
|