Miyakogusa Predicted Gene

Lj0g3v0010869.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 401 40.2 58.9 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 340 36.7 55.6 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 373 39.9 57.5 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 293 34.5 52.0  
LJGI gnl|LJGI|AV776874 509 99.6 99.6 weakly similar to UniRef100_Q7X9F7 Cluster: Lectin; n=1; Galega orientalis|Rep: Lectin - Galega orientalis, partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0010869.1 length: 621 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0035 56-83
165-194
482-511
HMMPfam PF13041 PPR_2 2.2e-11 84-140
196-244
274-322
HMMTigr TIGR00756 PPR: 0.0022 56-82
130-161
165-198
200-231
235-266
277-304
482-512
ProfileScan PS51375 PPR 6.369 54-88
127-161
162-196
197-231
232-266
275-309
310-340
360-390
479-513
444-478
no_ID  
HMMPanther PTHR24015 FAMILY 7.3e-70 56-539
HMMPanther PTHR24015:SF0 SUBFAMILY 7.3e-70 56-539
Wolf-PSORT
Lj0g3v0010869.1	plas 7, chlo 2, mito 2, E.R. 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0010869.1